STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_2651Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr8209 hypothetical protein. (143 aa)    
Predicted Functional Partners:
Cpin_2652
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_3019 transcriptional regulator, MarR family with acetyltransferase activity.
     0.963
Cpin_2650
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mfa:Mfla_1840 tRNA-adenosine deaminase.
       0.547
Cpin_5591
PFAM: protein of unknown function DUF1470; KEGG: ank:AnaeK_3459 protein of unknown function DUF1470.
  
     0.544
Cpin_2653
Hypothetical protein.
       0.443
Cpin_2654
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce1411 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.438
Cpin_4963
PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC- type glycine betaine transport system; KEGG: bcz:BCZK2060 glycine betaine/choline ABC transporter, ATP-binding protein.
  
  
 0.400
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.