STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_3466Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein. (196 aa)    
Predicted Functional Partners:
Cpin_3057
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: vvu:VV1_0729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase.
  
     0.770
Cpin_6710
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein.
  
     0.768
Cpin_4692
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: hch:HCH_05578 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase.
  
     0.762
Cpin_3464
PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4959 hypothetical protein.
       0.493
Cpin_3465
PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0693 major facilitator transporter.
       0.493
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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