STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_3714PFAM: PKD domain containing protein; phospholipase/Carboxylesterase; Two component regulator three Y domain protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: gur:Gura_2254 PKD domain-containing protein. (1771 aa)    
Predicted Functional Partners:
Cpin_3704
PFAM: PA14 domain protein; Fibronectin type III domain protein; Ig family protein; SMART: PA14 domain protein; Fibronectin type III domain protein; LamG domain protein jellyroll fold domain protein; KEGG: sbm:Shew185_0166 putative outer membrane adhesin like protein.
  
     0.651
Cpin_0607
PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: hypothetical protein; Belongs to the NAPRTase family.
  
     0.536
Cpin_3703
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pat:Patl_1073 protein-tyrosine kinase.
  
     0.526
Cpin_6629
KEGG: predicted protein.
  
     0.513
Cpin_6627
Hypothetical protein.
  
     0.489
Cpin_6899
KEGG: sil:SPO0571 PKD domain-containing protein; TIGRFAM: conserved repeat domain protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein.
  
     0.479
Cpin_6781
PFAM: peptidase S41; SMART: peptidase S41; KEGG: mmr:Mmar10_0061 peptidase S41.
  
     0.465
Cpin_0496
Hypothetical protein.
  
     0.457
Cpin_4353
KEGG: bra:BRADO4970 hypothetical protein.
  
     0.453
Cpin_6434
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bcr:BCAH187_A4528 TPR domain protein.
  
     0.447
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.