STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_4029Hypothetical protein. (126 aa)    
Predicted Functional Partners:
Cpin_4028
PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL2328 dipeptidyl aminopeptidase.
       0.776
Cpin_0371
Hypothetical protein.
  
     0.774
Cpin_2019
Hypothetical protein.
  
     0.774
Cpin_1118
KEGG: TPR Domain containing protein.
  
     0.773
Cpin_1913
Hypothetical protein.
  
     0.773
Cpin_3106
PFAM: Domain of unknown function DUF1835; KEGG: bat:BAS2610 hypothetical protein.
  
     0.773
Cpin_6600
Hypothetical protein.
  
     0.773
Cpin_0515
Hypothetical protein.
  
     0.772
Cpin_1137
SMART: Tetratricopeptide domain protein; KEGG: TPR Domain containing protein.
  
     0.772
Cpin_1667
Hypothetical protein.
  
     0.770
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.