STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_4081PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bce:BC2532 methyltransferase. (211 aa)    
Predicted Functional Partners:
Cpin_3278
Hypothetical protein.
    
 0.690
Cpin_5777
Hypothetical protein.
 
  
 0.558
Cpin_3285
Bis(5'-nucleosyl)- tetraphosphatase(asymmetrical); PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase.
   
 
 0.477
Cpin_3530
PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: sus:Acid_4768 aminoglycoside phosphotransferase.
 
   
 0.468
Cpin_5796
KEGG: scl:sce6061 putative kinase.
   
   0.446
Cpin_6277
KEGG: ecv:APECO1_3835 hypothetical protein.
   
   0.446
Cpin_6138
PFAM: Domain of unknown function DUF1801; KEGG: bsu:BSU05210 hypothetical protein.
 
     0.444
Cpin_4167
PFAM: DinB family protein.
  
   
 0.443
Cpin_3124
PFAM: RagB/SusD domain protein.
  
     0.441
Cpin_2957
PFAM: monooxygenase FAD-binding; KEGG: cak:Caul_0549 monooxygenase FAD-binding.
   
 0.422
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.