STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_4190PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: dol:Dole_1989 methyltransferase type 11. (208 aa)    
Predicted Functional Partners:
Cpin_3278
Hypothetical protein.
    
 0.690
Cpin_3285
Bis(5'-nucleosyl)- tetraphosphatase(asymmetrical); PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase.
 
 
 
 0.561
Cpin_5291
Erythronolide synthase, Mycocerosate synthase; PFAM: KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: gur:Gura_3097 beta-ketoacyl synthase.
 
 
 0.456
Cpin_5796
KEGG: scl:sce6061 putative kinase.
   
   0.446
Cpin_6277
KEGG: ecv:APECO1_3835 hypothetical protein.
   
   0.446
Cpin_2957
PFAM: monooxygenase FAD-binding; KEGG: cak:Caul_0549 monooxygenase FAD-binding.
   
 0.422
Cpin_3464
PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4959 hypothetical protein.
   
 0.422
Cpin_3796
4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; KEGG: ccs:CCNA_02487 4-hydroxybenzoate 3- monooxygenase.
   
 0.422
Cpin_4249
PFAM: monooxygenase FAD-binding; KEGG: msl:Msil_0387 monooxygenase FAD-binding.
   
 0.422
Cpin_4254
PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1438 monooxygenase, FAD-binding.
   
 0.422
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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