STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_4242PFAM: putative esterase; glycoside hydrolase family 13 domain protein; KEGG: sus:Acid_2103 putative esterase. (638 aa)    
Predicted Functional Partners:
Cpin_4240
KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
 
 0.917
Cpin_1434
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: pag:PLES_28971 PvdD(3); Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.861
Cpin_5189
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pfo:Pfl01_1845 peptide synthase.
  
  
 0.821
Cpin_5291
Erythronolide synthase, Mycocerosate synthase; PFAM: KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: gur:Gura_3097 beta-ketoacyl synthase.
  
  
 0.736
Cpin_5290
Erythronolide synthase, 6-methylsalicylic acid synthase; PFAM: Beta-ketoacyl synthase; Methyltransferase type 11; KR domain protein; Methyltransferase type 12; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17200 polyketide synthase.
  
  
 0.648
Cpin_2114
PFAM: glycoside hydrolase family 43; KEGG: sus:Acid_2993 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.617
Cpin_5289
PFAM: KR domain protein; Beta-ketoacyl synthase; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: pfl:PFL_2994 nonribosomal peptide synthase.
  
  
 0.586
Cpin_3410
Erythronolide synthase, Aspartate racemase; PFAM: condensation domain protein; KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_II1235 JamP.
  
  
 0.577
Cpin_3418
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; aminotransferase class-III; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein.
  
  
 0.571
Cpin_4848
PFAM: RagB/SusD domain protein.
  
     0.569
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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