STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_4837D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bra:BRADO2247 putative oxidoreductase. (973 aa)    
Predicted Functional Partners:
Cpin_0932
PFAM: protein of unknown function DUF162; KEGG: aba:Acid345_2721 iron-sulfur cluster binding protein.
 
 
 0.810
Cpin_4921
PFAM: protein of unknown function DUF162; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_3174 protein of unknown function DUF162.
 
 
 0.792
Cpin_0465
PFAM: protein of unknown function DUF162; KEGG: dde:Dde_1844 hypothetical protein.
 
 
 0.785
Cpin_4920
PFAM: protein of unknown function DUF162; KEGG: acp:A2cp1_3175 protein of unknown function DUF162.
 
 
 0.745
Cpin_3760
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: bat:BAS4419 electron transfer flavoprotein, beta subunit.
  
 
 0.744
Cpin_3759
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bba:Bd0021 electron transfer flavoprotein subunit alpha.
  
 
 0.737
Cpin_3823
TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: noc:Noc_1125 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
 
 0.700
Cpin_4725
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_1924 FAD linked oxidase-like.
 
 
0.621
Cpin_6534
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bba:Bd0026 succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
 0.601
Cpin_0728
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: gme:Gmet_1677 FAD dependent oxidoreductase.
  
 
 0.596
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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