STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_5122PFAM: alpha/beta hydrolase fold protein; KEGG: bcb:BCB4264_A2370 proline iminopeptidase. (302 aa)    
Predicted Functional Partners:
Cpin_4568
PFAM: alpha/beta hydrolase fold protein; KEGG: bce:BC2171 proline iminopeptidase.
  
  
 
0.923
Cpin_0261
Proline-specific peptidase; Releases the N-terminal proline from various substrates.
  
  
 
0.922
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.900
Cpin_6455
PFAM: Proline dehydrogenase; KEGG: hypothetical protein.
     
  0.900
Cpin_5291
Erythronolide synthase, Mycocerosate synthase; PFAM: KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: gur:Gura_3097 beta-ketoacyl synthase.
  
 0.584
Cpin_3410
Erythronolide synthase, Aspartate racemase; PFAM: condensation domain protein; KR domain protein; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_II1235 JamP.
  
 0.539
Cpin_3285
Bis(5'-nucleosyl)- tetraphosphatase(asymmetrical); PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase.
  
 
  0.514
Cpin_5296
PFAM: Beta-ketoacyl synthase; Methyltransferase type 11; Methyltransferase type 12; Alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; Alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3932 polyketide synthase.
  
 0.502
Cpin_5123
Hypothetical protein.
       0.459
Cpin_5297
PFAM: KR domain protein; AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I.
  
 0.425
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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