STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_7250PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. (307 aa)    
Predicted Functional Partners:
Cpin_1339
PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein.
  
     0.773
Cpin_7251
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pnu:Pnuc_1630 PfpI family intracellular peptidase.
       0.513
Cpin_6384
PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein.
  
     0.511
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
  
    0.505
Cpin_2407
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_0115 methyltransferase type 12.
  
  
  0.465
Cpin_0551
PFAM: transglutaminase domain protein.
   
 
 0.454
Cpin_4852
PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide domain protein; KEGG: ppd:Ppro_3009 hypothetical protein.
  
 
 0.406
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.