Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARB03754.1 | ARB04508.1 | B2G52_01595 | B2G52_06055 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | RnfH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family. | 0.775 |
| ARB03754.1 | ARB05023.1 | B2G52_01595 | B2G52_09130 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| ARB03754.1 | ARB05524.1 | B2G52_01595 | B2G52_08535 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
| ARB03754.1 | NuoE | B2G52_01595 | B2G52_02790 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
| ARB03754.1 | aat | B2G52_01595 | B2G52_01605 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.518 |
| ARB03754.1 | gap_1 | B2G52_01595 | B2G52_01600 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.536 |
| ARB03754.1 | kefC | B2G52_01595 | B2G52_01590 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.526 |
| ARB03754.1 | metG | B2G52_01595 | B2G52_02450 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.456 |
| ARB03754.1 | nqrE | B2G52_01595 | B2G52_04750 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH:ubiquinone reductase (Na(+)-transporting) subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | 0.759 |
| ARB03754.1 | nth | B2G52_01595 | B2G52_04550 | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.513 |
| ARB04508.1 | ARB03754.1 | B2G52_06055 | B2G52_01595 | RnfH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.775 |
| ARB05023.1 | ARB03754.1 | B2G52_09130 | B2G52_01595 | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.424 |
| ARB05023.1 | ARB05524.1 | B2G52_09130 | B2G52_08535 | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
| ARB05524.1 | ARB03754.1 | B2G52_08535 | B2G52_01595 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.457 |
| ARB05524.1 | ARB05023.1 | B2G52_08535 | B2G52_09130 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
| ARB05524.1 | NuoE | B2G52_08535 | B2G52_02790 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| ARB05524.1 | aat | B2G52_08535 | B2G52_01605 | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.454 |
| NuoE | ARB03754.1 | B2G52_02790 | B2G52_01595 | NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.428 |
| NuoE | ARB05524.1 | B2G52_02790 | B2G52_08535 | NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
| aat | ARB03754.1 | B2G52_01605 | B2G52_01595 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.518 |
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