STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gna33Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)    
Predicted Functional Partners:
B2G52_08580
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.801
ARB03991.1
Ribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
      
 0.542
ARB03895.1
Iron uptake system protein EfeO; With EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
ARB03896.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
ARB04077.1
Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.469
ARB04980.1
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.454
ARB04366.1
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.436
LpdA
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.432
ARB04852.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Neisseria lactamica
NCBI taxonomy Id: 486
Other names: ATCC 23970, CCUG 5853, CIP 72.17, DSM 4691, N. lactamica, NCTC 10617, Neisseria lactamicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.