STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LgtB2lacto-N-neotetraose biosynthesis glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)    
Predicted Functional Partners:
ARB04098.1
Glycosyl transferase family A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
LbpA
Lactoferrin/transferrin family TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
TbpA
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
ARB04097.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.571
B2G52_09790
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
B2G52_03635
Glycosyl transferase family A; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.545
B2G52_01415
IS1595 family transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
ARB04891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
ARB03641.1
Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
ARB04987.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
Your Current Organism:
Neisseria lactamica
NCBI taxonomy Id: 486
Other names: ATCC 23970, CCUG 5853, CIP 72.17, DSM 4691, N. lactamica, NCTC 10617, Neisseria lactamicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.