ARB04339.1 protein (Neisseria lactamica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Neisseria lactamica

NCBI taxonomy Id: 486
Other names: ATCC 23970, CCUG 5853, CIP 72.17, DSM 4691, N. lactamica, NCTC 10617, Neisseria lactamicus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARB03638.1	ARB04339.1	B2G52_00815	B2G52_05080	Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
ARB04134.1	ARB04339.1	B2G52_03860	B2G52_05080	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ARB04337.1	ARB04338.1	B2G52_05070	B2G52_05075	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.491
ARB04337.1	ARB04339.1	B2G52_05070	B2G52_05080	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
ARB04338.1	ARB04337.1	B2G52_05075	B2G52_05070	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.491
ARB04338.1	ARB04339.1	B2G52_05075	B2G52_05080	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
ARB04339.1	ARB03638.1	B2G52_05080	B2G52_00815	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
ARB04339.1	ARB04134.1	B2G52_05080	B2G52_03860	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
ARB04339.1	ARB04337.1	B2G52_05080	B2G52_05070	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyamine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.416
ARB04339.1	ARB04338.1	B2G52_05080	B2G52_05075	Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639