STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARB05360.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)    
Predicted Functional Partners:
ARB05361.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
ARB05359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.939
ARB05362.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
ARB05363.1
23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.726
pilK
Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
ARB04981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
ARB04493.1
Heme biosynthesis operon protein HemX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
ARB03866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.454
ARB05568.1
L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.438
ARB03856.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
Your Current Organism:
Neisseria lactamica
NCBI taxonomy Id: 486
Other names: ATCC 23970, CCUG 5853, CIP 72.17, DSM 4691, N. lactamica, NCTC 10617, Neisseria lactamicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.