Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARB05385.1 | ARB05386.1 | B2G52_11400 | B2G52_11405 | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.568 |
| ARB05385.1 | amiC | B2G52_11400 | B2G52_11410 | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.568 |
| ARB05385.1 | murD | B2G52_11400 | B2G52_00070 | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.499 |
| ARB05385.1 | murI | B2G52_11400 | B2G52_11395 | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.773 |
| ARB05386.1 | ARB05385.1 | B2G52_11405 | B2G52_11400 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.568 |
| ARB05386.1 | amiC | B2G52_11405 | B2G52_11410 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
| ARB05386.1 | murI | B2G52_11405 | B2G52_11395 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.593 |
| amiC | ARB05385.1 | B2G52_11410 | B2G52_11400 | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.568 |
| amiC | ARB05386.1 | B2G52_11410 | B2G52_11405 | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.851 |
| amiC | murI | B2G52_11410 | B2G52_11395 | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.695 |
| murD | ARB05385.1 | B2G52_00070 | B2G52_11400 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
| murD | murI | B2G52_00070 | B2G52_11395 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.967 |
| murI | ARB05385.1 | B2G52_11395 | B2G52_11400 | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| murI | ARB05386.1 | B2G52_11395 | B2G52_11405 | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.593 |
| murI | amiC | B2G52_11395 | B2G52_11410 | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.695 |
| murI | murD | B2G52_11395 | B2G52_00070 | Pilin; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.967 |