Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO1_LACBS | B0CQS1_LACBS | B0D6H2 | B0CQS1 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Chorismate synthase. | 0.981 |
ARO1_LACBS | B0CRD9_LACBS | B0D6H2 | B0CRD9 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Predicted protein. | 0.489 |
ARO1_LACBS | B0CVP9_LACBS | B0D6H2 | B0CVP9 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Chorismate mutase. | 0.800 |
ARO1_LACBS | B0D5V7_LACBS | B0D6H2 | B0D5V7 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Predicted protein. | 0.710 |
ARO1_LACBS | B0E006_LACBS | B0D6H2 | B0E006 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Anthranilate synthase-related protein. | 0.810 |
ARO1_LACBS | TRP1 | B0D6H2 | B0CS16 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Tryptophan synthase. | 0.748 |
ARO1_LACBS | TrpC | B0D6H2 | B0D0Y7 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.810 |
ARO1_LACBS | TrpD | B0D6H2 | B0DQ35 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | Anthranilate phosphoribosyltransferase, TrpD. | 0.593 |
B0CQS1_LACBS | ARO1_LACBS | B0CQS1 | B0D6H2 | Chorismate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | 0.981 |
B0CQS1_LACBS | B0CRD9_LACBS | B0CQS1 | B0CRD9 | Chorismate synthase. | Predicted protein. | 0.962 |
B0CQS1_LACBS | B0CVP9_LACBS | B0CQS1 | B0CVP9 | Chorismate synthase. | Chorismate mutase. | 0.994 |
B0CQS1_LACBS | B0D3J2_LACBS | B0CQS1 | B0D3J2 | Chorismate synthase. | Predicted protein. | 0.984 |
B0CQS1_LACBS | B0D5V7_LACBS | B0CQS1 | B0D5V7 | Chorismate synthase. | Predicted protein. | 0.964 |
B0CQS1_LACBS | B0DTT8_LACBS | B0CQS1 | B0DTT8 | Chorismate synthase. | Predicted protein. | 0.867 |
B0CQS1_LACBS | B0E006_LACBS | B0CQS1 | B0E006 | Chorismate synthase. | Anthranilate synthase-related protein. | 0.993 |
B0CQS1_LACBS | TRP1 | B0CQS1 | B0CS16 | Chorismate synthase. | Tryptophan synthase. | 0.985 |
B0CQS1_LACBS | TrpC | B0CQS1 | B0D0Y7 | Chorismate synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.993 |
B0CQS1_LACBS | TrpD | B0CQS1 | B0DQ35 | Chorismate synthase. | Anthranilate phosphoribosyltransferase, TrpD. | 0.898 |
B0CRD9_LACBS | ARO1_LACBS | B0CRD9 | B0D6H2 | Predicted protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family. | 0.489 |
B0CRD9_LACBS | B0CQS1_LACBS | B0CRD9 | B0CQS1 | Predicted protein. | Chorismate synthase. | 0.962 |
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