STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD16201RSC complex protein. (618 aa)    
Predicted Functional Partners:
CHB16201
SWI/SNF complex protein.
   
 0.972
B0D476_LACBS
Predicted protein.
    
 0.967
CHE16201
SWI-SNF chromatin remodeling complex, Snf5 subunit.
   
 0.956
BRD16202
RSC complex protein.
    
0.956
B0CRD4_LACBS
Predicted protein.
   
 
 0.946
B0D481_LACBS
Predicted protein.
    
 
 0.931
B0CWF5_LACBS
Predicted protein.
   
 0.919
ARP16202
Actin-related protein Arp4p; Belongs to the actin family.
   
 0.909
B0DSF3_LACBS
Predicted protein.
   
 
 0.868
MAP2_LACBS
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
 
 
    0.854
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.