STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CRV5_LACBSProtein transport protein Sec22; Belongs to the synaptobrevin family. (218 aa)    
Predicted Functional Partners:
B0CPA1_LACBS
Protein transport protein BET1.
   
 0.999
B0CR84_LACBS
SNARE protein SED5/Syntaxin 5.
   
 0.999
B0D8E0_LACBS
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.999
B0CY30_LACBS
SNARE protein syntaxin 18/UFE1.
   
 0.998
B0CPQ4_LACBS
Vesicular-fusion protein SEC17.
   
 0.996
B0DAP0_LACBS
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.996
B0DBI9_LACBS
CPII coat sec24 protein.
    
 0.996
B0DZX2_LACBS
SNARE protein YKT6; Belongs to the synaptobrevin family.
    
0.993
B0CRS3_LACBS
Sly1 vesicle trafficking sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.984
B0D5Z2_LACBS
Bet1-like protein.
   
 0.981
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.