STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CS30_LACBSPredicted protein. (312 aa)    
Predicted Functional Partners:
CHE16201
SWI-SNF chromatin remodeling complex, Snf5 subunit.
   
 
 0.622
HCP16201
Histone deacetylase complex protein.
     
 0.573
ARP16202
Actin-related protein Arp4p; Belongs to the actin family.
    
 
 0.528
B0D0D9_LACBS
Predicted protein.
    
 0.486
B0D4C3_LACBS
Predicted protein.
    
 0.486
B0D654_LACBS
Predicted protein.
    
 0.486
CHR16202
SNF2 family DNA-dependent ATPase.
    
  0.462
HDA16204
Histone deacetylase complex, catalytic component RPD3.
    
 0.459
HDA16202
Histone deacetylase complex, catalytic component RPD3.
    
 0.459
HDA16203
Histone deacetylase complex, catalytic component RPD3.
    
 0.459
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.