STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CS35_LACBSPredicted protein. (201 aa)    
Predicted Functional Partners:
PAFB16201
RNA polymerase II-associated protein.
     
 0.949
B0CYQ9_LACBS
Armadillo/beta-catenin/plakoglobin.
    
 0.928
B0DAL3_LACBS
Armadillo/beta-catenin/plakoglobin.
    
 0.928
B0DKK4_LACBS
Armadillo/beta-catenin/plakoglobin.
    
 0.928
B0D8S8_LACBS
Predicted protein.
    
 0.913
B0CPN5_LACBS
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.687
B0D4H9_LACBS
Predicted protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.687
B0D046_LACBS
Predicted protein.
     
 0.632
PAFE16201
RNA polymerase II-associated protein.
    
  0.630
RUVBL16201
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.628
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.