STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CSF1_LACBSPredicted protein. (620 aa)    
Predicted Functional Partners:
CHR16202
SNF2 family DNA-dependent ATPase.
   
 0.464
B0DHG7_LACBS
Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
 
 
  
 0.457
B0DK23_LACBS
Predicted protein.
    
 0.440
B0DSC2_LACBS
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.440
ARP16201
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.433
ARP16204
Actin-related protein Arp5p; Belongs to the actin family.
    
 0.428
B0CT59_LACBS
Predicted protein; Belongs to the protein kinase superfamily.
    
 0.422
B0CYX6_LACBS
Predicted protein.
    
 0.412
ARP16202
Actin-related protein Arp4p; Belongs to the actin family.
    
  0.411
B0DGU1_LACBS
Predicted protein.
    
  0.411
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.