STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CSU1_LACBSPredicted protein; Belongs to the peptidase C19 family. (1193 aa)    
Predicted Functional Partners:
B0CU64_LACBS
Predicted protein.
   
 
 0.920
B0CQN3_LACBS
Ubiquitin.
   
 0.865
B0D8E3_LACBS
Ubiquitin.
   
 0.865
B0CTY4_LACBS
Predicted protein.
   
 0.860
B0DPY0_LACBS
Predicted protein.
   
 0.860
B0CYH6_LACBS
Predicted protein.
    
  0.728
B0CYH7_LACBS
Predicted protein.
    
  0.728
B0D970_LACBS
Predicted protein.
    
  0.728
SDG16202
Histone methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
   0.695
B0CX50_LACBS
Sister chromatid cohesion protein.
   
    0.667
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.