STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CTF4_LACBSPredicted protein; Belongs to the DEAD box helicase family. (397 aa)    
Predicted Functional Partners:
B0CR68_LACBS
Predicted protein.
   
 0.838
B0D7P5_LACBS
Predicted protein.
   
 
 0.830
B0CQW8_LACBS
Predicted protein; Belongs to the DEAD box helicase family.
   
 0.826
B0CZZ1_LACBS
Predicted protein.
   
 0.812
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.794
B0DQV6_LACBS
Predicted protein.
   
   0.788
B0DL26_LACBS
Predicted protein.
   
  0.775
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.773
B0CWT2_LACBS
Predicted protein.
   
 0.771
B0DE66_LACBS
Predicted protein.
   
 
 0.768
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
Server load: low (14%) [HD]