STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CV47_LACBSPredicted protein. (1797 aa)    
Predicted Functional Partners:
B0D4Z2_LACBS
Predicted protein.
    
 0.705
SWDA16201
COMPASS complex protein.
   
0.658
HMTA16201
COMPASS complex protein.
    
 0.646
HAG16201
Histone acetyltransferase, GCN5 superfamily.
    
 0.520
SDG16201
Histone methyltransferase.
   
 0.510
B0DJE1_LACBS
Predicted protein.
   
 0.510
HTA16202
Histone H2A; Belongs to the histone H2A family.
   
 0.439
B0CVD1_LACBS
Predicted protein.
    
 0.432
B0CZH5_LACBS
Predicted protein.
    
  0.418
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.