STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CVV2_LACBSPredicted protein. (688 aa)    
Predicted Functional Partners:
B0DBI0_LACBS
Predicted protein; Belongs to the DEAD box helicase family.
  
 0.806
B0CRA1_LACBS
Predicted protein.
  
 
 0.780
B0DAI5_LACBS
Predicted protein.
  
 0.762
B0DPX4_LACBS
Predicted protein.
  
 
 0.728
B0CQY8_LACBS
Predicted protein.
   
 0.726
B0CQ61_LACBS
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.723
B0CS79_LACBS
Small nuclear ribonucleoprotein Sm D3.
   
 0.710
B0CUU1_LACBS
Predicted protein.
   
   0.704
B0CPD9_LACBS
Predicted protein.
  
 
 0.701
B0CUH8_LACBS
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.697
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.