STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CVY8_LACBSPectinesterase; Involved in maceration and soft-rotting of plant tissue. (336 aa)    
Predicted Functional Partners:
B0D189_LACBS
Glycoside hydrolase family 28 protein.
 
  
 0.945
B0E072_LACBS
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
  
  
 
0.901
B0E0A7_LACBS
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
  
  
 
0.901
B0D4Z2_LACBS
Predicted protein.
     
 0.599
B0D0X3_LACBS
Predicted protein.
    
   0.533
B0D349_LACBS
Predicted protein.
    
   0.483
B0CN98_LACBS
Predicted protein.
   
   0.482
SGA16201
Histone chaperone.
    
 0.471
B0CYA8_LACBS
Carbohydrate esterase family 4 protein.
      
 0.446
B0CUH8_LACBS
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.410
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.