STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CXR7_LACBSPredicted protein. (389 aa)    
Predicted Functional Partners:
B0CQZ9_LACBS
Predicted protein.
  
 
  0.517
B0CSW1_LACBS
Predicted protein.
  
 
  0.503
B0D0N6_LACBS
Predicted protein.
  
 
   0.490
B0D193_LACBS
Predicted protein.
  
   0.469
CHR16202
SNF2 family DNA-dependent ATPase.
   
 0.464
B0E0L5_LACBS
Predicted protein.
  
 
  0.453
B0DK23_LACBS
Predicted protein.
    
 0.440
B0DSC2_LACBS
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.439
ARP16201
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.433
B0DKL3_LACBS
Predicted protein.
  
 
  0.429
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
Server load: low (26%) [HD]