STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0CY76_LACBSPredicted protein. (353 aa)    
Predicted Functional Partners:
B0D7J4_LACBS
Eukaryotic translation initiation factor 5A.
   
 0.997
LIA1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
   
 0.856
B0CSY8_LACBS
Predicted protein.
 
 
    0.715
B0DAE1_LACBS
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.613
B0D0C5_LACBS
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.555
B0CPS0_LACBS
Predicted protein; Belongs to the dihydrofolate reductase family.
      
 0.548
B0DIG6_LACBS
Argininosuccinate synthase.
      
 0.541
B0CSQ6_LACBS
Arginase; Belongs to the arginase family.
     
 0.531
B0DLC0_LACBS
Tyrosine--tRNA ligase.
  
  
 0.531
B0CXW7_LACBS
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.510
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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