STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0D0M3_LACBSVacuolar protein sorting-associated protein. (1264 aa)    
Predicted Functional Partners:
B0DBF1_LACBS
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.991
B0CR26_LACBS
Predicted protein.
    
 
 0.990
B0DGA3_LACBS
Predicted protein.
    
 
 0.990
B0D9N1_LACBS
Predicted protein.
   
 
 0.901
B0DAP9_LACBS
Predicted protein.
   
 
 0.870
B0DPC4_LACBS
Predicted protein.
   
 
 0.870
B0CQK4_LACBS
Predicted protein.
    
 
 0.784
B0CQK5_LACBS
Predicted protein.
    
 
 0.784
B0CRR7_LACBS
Predicted protein.
    
 
 0.784
B0CZH3_LACBS
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 
 0.646
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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