STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0D9K0_LACBSPredicted protein; Belongs to the DEAD box helicase family. (449 aa)    
Predicted Functional Partners:
B0CVW0_LACBS
Predicted protein.
   
  0.943
B0D3P9_LACBS
Predicted protein.
   
 0.913
B0CPP4_LACBS
Predicted protein.
   
 
 0.859
B0DAK2_LACBS
Predicted protein.
   
 0.837
B0DK74_LACBS
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.830
B0CQW8_LACBS
Predicted protein; Belongs to the DEAD box helicase family.
  
0.826
B0CR68_LACBS
Predicted protein.
   
 0.822
B0CZZ1_LACBS
Predicted protein.
   
 0.810
B0D7G9_LACBS
Predicted protein.
   
  0.772
RRP36
rRNA biogenesis protein RRP36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity).
   
 0.768
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.