STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DA43_LACBSPredicted protein. (414 aa)    
Predicted Functional Partners:
B0E159_LACBS
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.783
B0CQK4_LACBS
Predicted protein.
    
 0.745
B0CQK5_LACBS
Predicted protein.
    
 0.745
B0CRR7_LACBS
Predicted protein.
    
 0.745
B0CS17_LACBS
Predicted protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.678
B0D6B1_LACBS
VAMP/synaptobrevin-like protein; Belongs to the synaptobrevin family.
    
 0.518
B0DB35_LACBS
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.488
B0DI85_LACBS
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.464
B0D8J9_LACBS
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.462
B0DFS9_LACBS
Predicted protein.
    
  0.453
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.