STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DIM7_LACBSPredicted protein. (332 aa)    
Predicted Functional Partners:
B0DSR3_LACBS
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.980
B0D7U8_LACBS
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.978
B0D4H1_LACBS
Predicted protein.
  
  
 
0.904
ERG25p-2
C4-methyl sterol oxidase; Belongs to the sterol desaturase family.
   
  
 0.564
B0CP35_LACBS
Predicted protein.
   
 
 0.549
B0D0T7_LACBS
Predicted protein.
   
 
 0.549
B0D6Q2_LACBS
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
  
 0.530
B0D8A3_LACBS
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.513
B0D0H8_LACBS
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.477
B0CRL2_LACBS
Delta 9-fatty acid desaturase protein; Belongs to the fatty acid desaturase type 1 family.
  
  
 0.456
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.