B0DJI4_LACBS protein (Laccaria bicolor) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

B0DJI4_LACBS

Predicted protein. (275 aa)

Predicted Functional Partners:

B0D150_LACBS

0.661

LOS1

0.561

B0D3N2_LACBS

0.543

B0CYZ5_LACBS

0.529

B0D3Z5_LACBS

0.449

B0CR94_LACBS

0.441

B0DZD0_LACBS

0.439

B0DJD6_LACBS

0.414

Your Current Organism:

Laccaria bicolor

NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0CR94_LACBS	B0D3Z5_LACBS	B0CR94	B0D3Z5	Predicted protein.	Predicted protein.	0.871
B0CR94_LACBS	B0DJI4_LACBS	B0CR94	B0DJI4	Predicted protein.	Predicted protein.	0.441
B0CR94_LACBS	B0DZD0_LACBS	B0CR94	B0DZD0	Predicted protein.	Predicted protein.	0.573
B0CYZ5_LACBS	B0D3N2_LACBS	B0CYZ5	B0D3N2	Predicted protein.	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	0.845
B0CYZ5_LACBS	B0DJI4_LACBS	B0CYZ5	B0DJI4	Predicted protein.	Predicted protein.	0.529
B0D150_LACBS	B0DJI4_LACBS	B0D150	B0DJI4	tRNA ligase.	Predicted protein.	0.661
B0D150_LACBS	LOS1	B0D150	B0DAD3	tRNA ligase.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre-tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity); Belongs to the exportin family.	0.414
B0D3N2_LACBS	B0CYZ5_LACBS	B0D3N2	B0CYZ5	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	Predicted protein.	0.845
B0D3N2_LACBS	B0DJI4_LACBS	B0D3N2	B0DJI4	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	Predicted protein.	0.543
B0D3Z5_LACBS	B0CR94_LACBS	B0D3Z5	B0CR94	Predicted protein.	Predicted protein.	0.871
B0D3Z5_LACBS	B0DJI4_LACBS	B0D3Z5	B0DJI4	Predicted protein.	Predicted protein.	0.449
B0DJD6_LACBS	B0DJI4_LACBS	B0DJD6	B0DJI4	Predicted protein.	Predicted protein.	0.414
B0DJD6_LACBS	LOS1	B0DJD6	B0DAD3	Predicted protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre-tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity); Belongs to the exportin family.	0.414
B0DJI4_LACBS	B0CR94_LACBS	B0DJI4	B0CR94	Predicted protein.	Predicted protein.	0.441
B0DJI4_LACBS	B0CYZ5_LACBS	B0DJI4	B0CYZ5	Predicted protein.	Predicted protein.	0.529
B0DJI4_LACBS	B0D150_LACBS	B0DJI4	B0D150	Predicted protein.	tRNA ligase.	0.661
B0DJI4_LACBS	B0D3N2_LACBS	B0DJI4	B0D3N2	Predicted protein.	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	0.543
B0DJI4_LACBS	B0D3Z5_LACBS	B0DJI4	B0D3Z5	Predicted protein.	Predicted protein.	0.449
B0DJI4_LACBS	B0DJD6_LACBS	B0DJI4	B0DJD6	Predicted protein.	Predicted protein.	0.414
B0DJI4_LACBS	B0DZD0_LACBS	B0DJI4	B0DZD0	Predicted protein.	Predicted protein.	0.439