STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DL92_LACBSPredicted protein. (735 aa)    
Predicted Functional Partners:
B0D5W5_LACBS
Predicted protein.
   
 0.707
B0DAQ9_LACBS
Predicted protein.
   
 0.707
B0D4U3_LACBS
Predicted protein; Belongs to the MRE11/RAD32 family.
  
 0.656
B0D9S3_LACBS
Predicted protein.
   
 0.632
B0DBH1_LACBS
Predicted protein.
   
 0.623
B0DA82_LACBS
Predicted protein.
   
 0.617
B0D1N0_LACBS
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.612
B0DF26_LACBS
Predicted protein.
  
 0.612
B0CSK7_LACBS
Predicted protein.
   
 0.604
B0CTT7_LACBS
Predicted protein; Belongs to the PI3/PI4-kinase family.
   
 0.600
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.