STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DP49_LACBSPredicted protein. (297 aa)    
Predicted Functional Partners:
B0DPU8_LACBS
Predicted protein.
  
  
  0.937
MKAR_LACBS
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.935
FAS-2
Fatty acid synthase.
    
 0.903
B0CQV5_LACBS
Predicted protein.
     
 0.559
B0CRX2_LACBS
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.520
B0DBM3_LACBS
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.510
B0DFH2_LACBS
Predicted protein.
   
 
  0.504
B0CVK3_LACBS
Predicted protein.
   
 0.480
B0CWL2_LACBS
Polyketide beta-ketoacyl-synthase.
   
 0.480
B0D5V4_LACBS
Predicted protein.
  
     0.469
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.