STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DYA9_LACBSPredicted protein. (1028 aa)    
Predicted Functional Partners:
PAFB16201
RNA polymerase II-associated protein.
    
 0.983
B0D085_LACBS
Predicted protein.
    
 0.651
PAFE16201
RNA polymerase II-associated protein.
    
 0.588
PAFA16201
RNA polymerase II-associated protein.
   
 0.560
B0D4B4_LACBS
Cytochrome c C1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.521
PAFC16201
RNA polymerase II-associated protein.
    
 0.487
B0D590_LACBS
Predicted protein.
    
 0.487
B0CY83_LACBS
Predicted protein.
    
  0.483
B0D4Z2_LACBS
Predicted protein.
    
  0.481
B0CRW9_LACBS
Predicted protein.
    
 0.478
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.