STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0DYP0_LACBSPredicted protein; Belongs to the FPP/GGPP synthase family. (363 aa)    
Predicted Functional Partners:
B0CPS7_LACBS
Predicted protein.
 
 
 0.980
B0CNR0_LACBS
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.971
B0DA64_LACBS
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.971
B0E0J7_LACBS
Predicted protein; Belongs to the FPP/GGPP synthase family.
    
 0.971
B0DGM5_LACBS
Predicted protein; Belongs to the FPP/GGPP synthase family.
    
 0.952
B0E3X4_LACBS
Predicted protein.
    
 0.952
B0DFU7_LACBS
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.946
B0DI13_LACBS
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.946
B0D5U4_LACBS
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.935
B0DNX4_LACBS
Predicted protein.
     
 0.927
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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