STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0E0P4_LACBSProtein transport protein sec31. (1437 aa)    
Predicted Functional Partners:
B0DAP0_LACBS
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.997
B0DBI9_LACBS
CPII coat sec24 protein.
   
 0.996
B0DTB2_LACBS
Vesicle budding-related protein; Belongs to the WD repeat SEC13 family.
    
 0.996
B0DPZ1_LACBS
GTP-binding protein sar1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.990
B0DPZ6_LACBS
GTP-binding protein sar1.
   
 0.990
B0DAQ1_LACBS
Sec24-related protein.
   
 0.986
B0CSG3_LACBS
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.900
B0DE98_LACBS
Predicted protein.
  
  
 
0.900
B0CRV5_LACBS
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.752
B0CSU6_LACBS
Trafficking protein particle complex subunit BET3.
     
 0.746
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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