STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0E0Y2_LACBSPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (478 aa)    
Predicted Functional Partners:
B0CYJ0_LACBS
Predicted protein.
    
 
 0.874
B0DK98_LACBS
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.829
B0DIM4_LACBS
Predicted protein.
   
 
 0.779
B0CQ73_LACBS
Predicted protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.774
B0CSV0_LACBS
Predicted protein.
   
   0.760
B0DBT7_LACBS
Predicted protein.
   
 
 0.759
B0CSP4_LACBS
Predicted protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.754
B0CZG0_LACBS
Predicted protein.
  
   0.751
B0D222_LACBS
Predicted protein.
  
   0.750
B0CQW0_LACBS
Predicted protein.
   
   0.742
Your Current Organism:
Laccaria bicolor
NCBI taxonomy Id: 486041
Other names: L. bicolor S238N-H82, Laccaria bicolor S238N-H82
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