STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD13637.1Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. (478 aa)    
Predicted Functional Partners:
AOD14494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.792
AOD14127.1
Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.729
AOD13636.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.691
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.616
AOD13634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
AOD13635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
BER92_01095
NdvB protein; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.523
entF
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.492
bpH1
Histidine biosynthesis protein HisIE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.467
AOD13632.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.457
Your Current Organism:
Xanthomonas fragariae
NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.