Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AOD13660.1beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)    
Predicted Functional Partners:
fucA1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.790
AOD15830.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.790
nahA
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.781
AOD15590.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.780
AOD16495.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.772
bga2
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.656
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
  0.598
AOD16456.1
Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.588
hutH
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.562
AOD14741.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.558
Your Current Organism:
Xanthomonas fragariae
NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae
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