Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AOD13952.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
AOD13686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.902
xopAE
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.861
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
    
 0.854
AOD15645.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.850
AOD16241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.793
AOD16300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.788
AOD14163.1
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.763
AOD13504.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.757
AOD13951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.751
AOD16182.1
Aquaporin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.746
Your Current Organism:
Xanthomonas fragariae
NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae
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