STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOD14116.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
uptE
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
AOD15770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
AOD13733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
AOD14068.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
AOD14967.1
Transmembrane repetitive protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
BER92_01330
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
AOD14119.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.559
AOD15326.1
Barnase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
AOD16361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
hipB_2
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
Your Current Organism:
Xanthomonas fragariae
NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.