recO protein (Xanthomonas fragariae) - STRING interaction network

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Score

recO

DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (240 aa)

Predicted Functional Partners:

recR

0.972

era

0.873

rnc

0.769

AOD14504.1

0.719

AOD14521.1

0.715

AOD13659.1

0.696

ftsB

0.635

recF

0.631

AOD13675.1

0.619

recN

0.609

Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD13659.1	recO	BER92_01585	BER92_06985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.696
AOD13675.1	AOD14521.1	BER92_01690	BER92_06970	Ketosynthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
AOD13675.1	recO	BER92_01690	BER92_06985	Ketosynthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.619
AOD14504.1	era	BER92_06865	BER92_06980	Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.573
AOD14504.1	recO	BER92_06865	BER92_06985	Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.719
AOD14521.1	AOD13675.1	BER92_06970	BER92_01690	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ketosynthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
AOD14521.1	era	BER92_06970	BER92_06980	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.830
AOD14521.1	recO	BER92_06970	BER92_06985	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.715
AOD14521.1	rnc	BER92_06970	BER92_06975	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.882
era	AOD14504.1	BER92_06980	BER92_06865	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
era	AOD14521.1	BER92_06980	BER92_06970	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DUF4845 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
era	recO	BER92_06980	BER92_06985	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.873
era	rnc	BER92_06980	BER92_06975	GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.938
ftsB	recO	BER92_08750	BER92_06985	Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.635
recF	recN	BER92_00020	BER92_07955	Transposase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	0.607
recF	recO	BER92_00020	BER92_06985	Transposase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.631
recF	recR	BER92_00020	BER92_14075	Transposase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.750
recN	recF	BER92_07955	BER92_00020	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	Transposase; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	0.607
recN	recO	BER92_07955	BER92_06985	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.609
recN	recR	BER92_07955	BER92_14075	DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.	Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.482