AOD14550.1 protein (Xanthomonas fragariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD13965.1	AOD14062.1	BER92_03525	BER92_04155	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AOD13965.1	AOD14088.1	BER92_03525	BER92_04320	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
AOD13965.1	AOD14550.1	BER92_03525	BER92_07135	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AOD13965.1	AOD15619.1	BER92_03525	BER92_13975	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AOD13965.1	AOD16488.1	BER92_03525	BER92_03930	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AOD13965.1	AOD16695.1	BER92_03525	BER92_16290	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AOD13984.1	AOD14194.1	BER92_03640	BER92_04925	Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
AOD13984.1	AOD14550.1	BER92_03640	BER92_07135	Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.721
AOD13984.1	AOD15619.1	BER92_03640	BER92_13975	Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.838
AOD13984.1	AOD16488.1	BER92_03640	BER92_03930	Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
AOD14062.1	AOD13965.1	BER92_04155	BER92_03525	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	0.763
AOD14062.1	AOD14088.1	BER92_04155	BER92_04320	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AOD14062.1	AOD14550.1	BER92_04155	BER92_07135	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
AOD14062.1	AOD15619.1	BER92_04155	BER92_13975	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
AOD14062.1	AOD16488.1	BER92_04155	BER92_03930	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
AOD14062.1	AOD16695.1	BER92_04155	BER92_16290	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
AOD14088.1	AOD13965.1	BER92_04320	BER92_03525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	0.746
AOD14088.1	AOD14062.1	BER92_04320	BER92_04155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AOD14088.1	AOD14550.1	BER92_04320	BER92_07135	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AOD14088.1	AOD15619.1	BER92_04320	BER92_13975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425