Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potGPutrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (376 aa)    
Predicted Functional Partners:
AOD14618.1
Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AOD14619.1
Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AOD16543.1
Spermidine/putrescine ABC transporter substrate-binding protein PotF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
msbA-2
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     
0.790
comA
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.700
BER92_07510
Diguanylate cyclase response regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
AOD16330.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.596
modB
Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.544
ugpC
Sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC; Part of the UgpABCE glycerol-3-phosphate uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.489
cysA
Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
  
 
0.431
Your Current Organism:
Xanthomonas fragariae
NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae
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