pdxY protein (Xanthomonas fragariae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD14682.1	pdxY	BER92_07990	BER92_07980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AOD14682.1	tyrA	BER92_07990	BER92_07985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Prephenate dehydrogenase; Catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
AOD16642.1	pdxY	BER92_13455	BER92_07980	YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.646
argI	pdxY	BER92_01350	BER92_07980	Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
dnaJ	pdxY	BER92_07975	BER92_07980	Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
dnaJ	tyrA	BER92_07975	BER92_07985	Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]	Prephenate dehydrogenase; Catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.462
pdxH	pdxJ	BER92_14675	BER92_00075	Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).	Transposase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	0.958
pdxH	pdxY	BER92_14675	BER92_07980	Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
pdxJ	pdxH	BER92_00075	BER92_14675	Transposase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).	0.958
pdxJ	pdxY	BER92_00075	BER92_07980	Transposase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
pdxY	AOD14682.1	BER92_07980	BER92_07990	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439
pdxY	AOD16642.1	BER92_07980	BER92_13455	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.	0.646
pdxY	argI	BER92_07980	BER92_01350	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.	0.404
pdxY	dnaJ	BER92_07980	BER92_07975	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]	0.448
pdxY	pdxH	BER92_07980	BER92_14675	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).	0.931
pdxY	pdxJ	BER92_07980	BER92_00075	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transposase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	0.909
pdxY	pheT	BER92_07980	BER92_06020	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.407
pdxY	tyrA	BER92_07980	BER92_07985	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Prephenate dehydrogenase; Catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
pheT	pdxY	BER92_06020	BER92_07980	phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
tyrA	AOD14682.1	BER92_07985	BER92_07990	Prephenate dehydrogenase; Catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.439