AOD14744.1 protein (Xanthomonas fragariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD14741.1	AOD14742.1	BER92_08330	BER92_08335	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.575
AOD14741.1	AOD14743.1	BER92_08330	BER92_08340	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
AOD14741.1	AOD14744.1	BER92_08330	BER92_08345	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
AOD14742.1	AOD14741.1	BER92_08335	BER92_08330	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.575
AOD14742.1	AOD14743.1	BER92_08335	BER92_08340	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
AOD14742.1	AOD14744.1	BER92_08335	BER92_08345	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AOD14742.1	AOD14745.1	BER92_08335	BER92_08350	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AOD14743.1	AOD14741.1	BER92_08340	BER92_08330	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
AOD14743.1	AOD14742.1	BER92_08340	BER92_08335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
AOD14743.1	AOD14744.1	BER92_08340	BER92_08345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AOD14743.1	AOD14745.1	BER92_08340	BER92_08350	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AOD14744.1	AOD14741.1	BER92_08345	BER92_08330	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
AOD14744.1	AOD14742.1	BER92_08345	BER92_08335	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AOD14744.1	AOD14743.1	BER92_08345	BER92_08340	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
AOD14744.1	AOD14745.1	BER92_08345	BER92_08350	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526
AOD14744.1	acs	BER92_08345	BER92_01150	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.	0.428
AOD14744.1	phnW	BER92_08345	BER92_18005	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase class V; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.	0.414
AOD14745.1	AOD14742.1	BER92_08350	BER92_08335	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AOD14745.1	AOD14743.1	BER92_08350	BER92_08340	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AOD14745.1	AOD14744.1	BER92_08350	BER92_08345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.526