node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOD15027.1 | AOD15028.1 | BER92_10075 | BER92_10080 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
AOD15027.1 | bamB | BER92_10075 | BER92_10070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.965 |
AOD15027.1 | ndk | BER92_10075 | BER92_10095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.627 |
AOD15027.1 | pilF | BER92_10075 | BER92_10085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.736 |
AOD15027.1 | rlmN | BER92_10075 | BER92_10090 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.657 |
AOD15028.1 | AOD15027.1 | BER92_10080 | BER92_10075 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
AOD15028.1 | AOD15236.1 | BER92_10080 | BER92_11475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.767 |
AOD15028.1 | bamB | BER92_10080 | BER92_10070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.708 |
AOD15028.1 | mreB | BER92_10080 | BER92_02745 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
AOD15028.1 | ndk | BER92_10080 | BER92_10095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.803 |
AOD15028.1 | pilF | BER92_10080 | BER92_10085 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
AOD15028.1 | rlmN | BER92_10080 | BER92_10090 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 23S rRNA (adenine(2503)-C(2))-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.850 |
AOD15028.1 | rplV | BER92_10080 | BER92_05190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.698 |
AOD15028.1 | rplW | BER92_10080 | BER92_05175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.698 |
AOD15028.1 | secA | BER92_10080 | BER92_03820 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.711 |
AOD15236.1 | AOD15028.1 | BER92_11475 | BER92_10080 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.767 |
bamB | AOD15027.1 | BER92_10070 | BER92_10075 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.965 |
bamB | AOD15028.1 | BER92_10070 | BER92_10080 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
bamB | ndk | BER92_10070 | BER92_10095 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.623 |
bamB | pilF | BER92_10070 | BER92_10085 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.667 |